NAC Neuroimage Analysis Center

Publications

Sorted by year: 2005, 2004, 2003, 2002, 2001, 2000, 1999, 1998

2005

Karni et al. An fMRI study of the differential effects of word presentation rates (reading acceleration) on dyslexic readers brain activity patterns.
Journal of Neurolinguistics 2005; 18:197-219. SPL Technical Report #507, posted April 2005.

Goldberg-Zimring et al. Statistical Validation of Brain Tumor Shape Approximation via Spherical Harmonics for Image-Guided Neurosurgery.
Acad Radiol 2005; 12:459-466. SPL Technical Report #505, posted April 2005.

Inder et al. Abnormal Cerebral Structure Is Present at Term in Premature Infants.
Pediatrics 2005; 115(2):286-294. SPL Technical Report #503, posted February 2005.

Golland et al. Detection and Analysis of Statistical Differences in Anatomical Shape.
Medical Image Analysis 2005; 9(1):69-86. SPL Technical Report #502, posted February 2005.

Wiegand et al. An In Vivo MRI Study of Prefrontal Cortical Complexity in First-Episode Psychosis.
Am J Psychiatry 2005; 162:65-70. SPL Technical Report #500, posted January 2005.

Ferenc A. Jolesz: Future perspectives for intraoperative MRI.
In Neurosurg Clinics of North America: Intraoperative MRI Development. Eds. Christopher Nimsky and Rudolf Falbusch. 2005; 16(1):201-213. SPL Technical Report #499, posted January 2005.

2004

Morocz et al. Temporal unfolding of mental calculation: a 3D PRESTO fMRI study.
Poster presentation at the 10th Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. June 13-17, 2004. SPL Technical Report #496, posted December 2004.

Ratiu and Talos The Tale of Phineas Gage, Digitally Remastered.
NEJM 2004; 351(23):e21. SPL Technical Report #495, posted December 2004.

Clatz et al. Robust Nonrigid Registration to Capture Brain Shift from Intraoperative MRI.
iMRI Symposium 2004; SPL Technical Report #494, posted November 2004.

Clatz et al. In Silico Tumor Growth: Application to Glioblastomas.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 337-345. SPL Technical Report #489, posted October 2004.

Cosman et al. Exact MAP Activity Detection in fMRI Using a GLM with an Ising Spatial Prior.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 703-710. SPL Technical Report #488, posted October 2004.

Vigneron et al. Modelling Surgical Cuts, Retractions, and Resections via Extended Finite Element Method.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 311-318. SPL Technical Report #487, posted October 2004.

Nakamura et al. Control System for MR-Guided Cryotherapy Short-Term Prediction of Therapy Boundary Using Automatic Segmentation and 3D Optical Flow.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 542-550. SPL Technical Report #486, posted October 2004.

Tsai et al. Level Set Methods in an EM Framework for Shape Classification and Estimation.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 1-9. SPL Technical Report #485, posted October 2004.

Maddah et al. Automatic Optimization of Segmentation Algorithms Through Simultaneous Truth and Performance Level Estimation (STAPLE).
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 274-282. SPL Technical Report #484, posted October 2004.

De Craene et al. Multi-subject Registration for Unbiased Statistical Atlas Construction.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 655-662. SPL Technical Report #482, posted October 2004.

Gan et al. Multiresolution Image Registration Based on Kullback-Leibler Distance.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 599-606. SPL Technical Report #481, posted October 2004.

Koseki et al. Precise Evaluation of Positioning Repeatability of MR-Compatible Manipulator Inside MRI.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 192-199. SPL Technical Report #480, posted October 2004.

Liu et al. Discriminative MR Image Feature Analysis for Automatic Schizophrenia and Alzheimer's Disease Classification.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 393-400. SPL Technical Report #479, posted October 2004.

Park et al. An Analysis Tool for Quantification of Diffusion Tensor MRI Data.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 1089-1090. SPL Technical Report #477, posted October 2004.

Park et al. White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study.
Neuroimage 2004; 23(1):213-223. SPL Technical Report #476, posted October 2004.

Park et al. Method for Combining Information from White Matter Fiber Tracking and Gray Matter Parcellation.
Am J Neuroradiol 2004; 25:1318-1324. SPL Technical Report #475, posted October 2004.

Haidar et al. Characterizing the Shape of Anatomical Structures with Poisson's Equation.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 266-273. SPL Technical Report #474, posted October 2004.

Bouix et al. Evaluating Automatic Brain Tissue Classifiers.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 1038-1039. SPL Technical Report #473, posted October 2004.

Pichon et al. A Statistically Based Flow for Image Segmentation.
Medical Image Analysis 2004; 8(3):267-274. SPL Technical Report #472, posted October 2004.

San Jose Estepar et al. Robust Generalized Total Least Squares Iterative Closest Point Registration.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 234-241. SPL Technical Report #471, posted October 2004.

Martin-Fernandez et al. 3D Bayesian Regularization of Diffusion Using Multivariate Gaussian Markov Random Fields.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 351-359. SPL Technical Report #470, posted October 2004.

Castano-Moraga et al. Anisotropic Interpolation of DT-MRI.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 343-350. SPL Technical Report #469, posted October 2004.

O'Donnell et al. Interface Detection in Diffusion Tensor MRI.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 360-367. SPL Technical Report #468, posted October 2004.

Brun et al. Clustering Fiber Traces Using Normalized Cuts.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3216, pp. 368-375. SPL Technical Report #467, posted October 2004.

Friman et al. Bias in Resampling-Based Thresholding of Statistical Maps in fMRI.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 711-718. SPL Technical Report #466, posted October 2004.

Zou et al. A Prospective Multi-Institutional Study of the Reproducibility of fMRI: A Preliminary Report from the Biomedical Informatics Research Network.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 769-776. SPL Technical Report #465, posted October 2004.

Pohl et al. Coupling Statistical Segmentation and PCA Shape Modeling.
Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2004), Saint-Malo, France, September 26-29, 2004, LNCS 3217, pp. 151-159. SPL Technical Report #464, posted October 2004.

Pohl et al. Anatomical Guided Segmentation with Non-stationary Tissue Class Distributions in an Expectation-Maximization Framework.
Proceedings of IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2004; 81-84. SPL Technical Report #462, posted September 2004.

Ratiu et al. The Tale of Phineas Gage, Digitally Remastered. Case report.
Journal of Neurotrauma 2004; 21(5):637-643. SPL Technical Report #460, posted September 2004.

Warfield et al. Simultaneous Truth and Performance Level Estimation (STAPLE): An Algorithm for the Validation of Image Segmentation.
IEEE TMI, 2004; 23(7):903-921. SPL Technical Report #455, posted July 2004.

Yoo et al. Evaluating Requirements for Spatial Resolution of fMRI for Neurosurgical Planning.
Human Brain Mapping 2004; 21(1):34-43. SPL Technical Report #450, posted June 2004.

Tolsa et al. Early Alteration of Structural and Functional Brain Development in Premature Infants Born with Intrauterine Growth Restriction.
Pediatric Research 2004; 56(1). SPL Technical Report #449, posted June 2004.

Pieper et al. 3D Slicer.
Proceedings of IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2004; 632-635. SPL Technical Report #448, posted May 2004.

Anderson et al. A Limited Range of Measures of 2D Ultrasound Correlate with 3D MRI Cerebral Volumes in the Premature Infant at Term.
Ultrasound Med Biol. 2004 Jan;30(1):11-8. SPL Technical Report #446, posted May 2004.

Grau et al. Improved Watershed Transform for Medical Image Segmentation using Prior Information.
IEEE Trans Med Imaging. 2004 Apr;23(4):447-58. SPL Technical Report #445, posted May 2004.

Als et al. Early Experience Alters Brain Function and Structure.
Pediatrics. 2004 Apr;113(4):846-857. SPL Technical Report #444, posted May 2004.

Alberola-López et al. Comments on: A Methodology for Evaluation of Boundary Detection Algorithms on Medical Images.
IEEE Transactions on Medical Imaging 2004;23(5):658-660. SPL Technical Report #439, posted May 2004.

Zou et al. Three validation metrics for automated probabilistic image segmentation of brain tumors.
Statist. Med. 2004; 23:1259-1282. SPL Technical Report #433, posted May 2004.

Wei et al. Functional MRI of Auditory Verbal Working Memory: Long-term Reproducibility Analysis.
NeuroImage 2004; 21:1000-1008. SPL Technical Report #431, posted March 2004.

Levitt et al. Shape of Caudate Nucleus and its Cognitive Correlates in Neuroleptic-naive Schizotypal Personality Disorder.
Biol Psychiatry 2004; 55(2):177-184. SPL Technical Report #421, posted February 2004.

Maier et al. Biexponential Diffusion Tensor Analysis of Human Brain Diffusion Data.
Magn Reson Med 2004; 51(2):321-330. SPL Technical Report #420, posted February 2004.

Kubicki et al. Comparison of Single-Shot Echo-Planar and Line Scan Protocols for Diffusion Tensor Imaging.
Acad Radiol 2004; 11:224-232. SPL Technical Report #411, posted January 2004.

Zou et al. Statistical Validation of Image Segmentation Quality Based on a Spatial Overlap Index.
Acad Radiol 2004; 11:178-189. SPL Technical Report #410, posted January 2004.

Zou et al. What Is Evidence-Based Medicine?
Acad Radiol 2004; 11:127-133. SPL Technical Report #409, posted January 2004.

Wiegand et al. Prefrontal Cortical Thickness in First-Episode Psychosis: A Magnetic Resonance Imaging Study.
Biol Psychiatry 2004;55(2):131-140. SPL Technical Report #408, posted January 2004.

2003

Talos et al. Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-guided Neurosurgery.
Proceedings of the 6th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2003) Part I. pages 407-415. November 15-18, 2003. Montreal, Canada. SPL Technical Report #404, posted January 2004.

Spencer et al. Abnormal neural synchrony in schizophrenia.
J Neuroscience 2003; 23:7407-7411. SPL Technical Report #403, posted January 2004.

Dickey et al. An MRI study of fusiform gyrus in schizotypal personality disorder.
Schizophr Res 2003; 64:35-39. SPL Technical Report #392, posted January 2004.

Kasai et al. Differences and similarities in insular and temporal pole MRI gray matter volume abnormalities in first-episode schizophrenia and affective psychosis.
Archives of General Psychiatry 2003; 60:1069-1077.SPL Technical Report #391, posted January 2004.

Zöllei et al. A Unified Statistical and Information Theoretic Framework for Multi-modal Image Registration.
Information Processing in Medical Imaging (IPMI) 2003. SPL Technical Report #377, posted August 2003.

Hunt et al. Assessment of the impact of the removal of cerebrospinal fluid on cerebral tissue volumes by advanced volumetric 3D-MRI in posthaemorrhagic hydrocephalus in a premature infant.
J Neurol Neurosurg Psychiatry 2003; 74:658-660. SPL Technical Report #370, posted May 2003.

Onitsuka et al. Fusiform gyrus volume reduction and facial recognition in chronic schizophrenia.
Archives of General Psychiatry 2003; 60:349-355. SPL Technical Report #367, posted April 2003.

Niznikiewicz et al. Recent structural and functional imaging findings in schizophrenia.
Current Opinion in Psychiatry 2003, 16:123-147. SPL Technical Report #362, posted March 2003.

Kasai et al. Progressive Decrease of Left Superior Temporal Gyrus Gray Matter Volume in Patients With First-Episode Schizophrenia.
Am J Psychiatry 2003; 160:156-164. SPL Technical Report #357, posted January 2003.

2002

Gilbertson et al. Smaller hippocampal volume predicts pathologic vulnerability to psychological trauma.
Nature Neuroscience 2002; 5(11):1242-1247. SPL Technical Report #358, posted January 2003.

Kubicki et al. Voxel-Based Morphometric Analysis of Gray Matter in First Episode Schizophrenia.
NeuroImage 2002; 17:1711-1719. SPL Technical Report #356, posted December 2002.

Kubicki et al. Diffusion Tensor Imaging and Its Application to Neuropsychiatric Disorders.
Harvard Rev Psychiatry 2002; 10(6):324-336. SPL Technical Report #355, posted December 2002.

Ferrant et al. Serial Registration of Intraoperative MR Images of the Brain.
Medical Image Analysis, 2002; 6:337-359. SPL Technical Report #352, posted December 2002.

Gering et al. Recognizing Deviations from Normalcy for Brain Tumor Segmentation.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 508-515, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #351, posted November 2002.

Golland et al. Discriminative Analysis for Image-Based Population Comparisons.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 508-515, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #350, posted November 2002.

Guimond et al. Automatic Statistical Identification of Neuroanatomical Abnormalities Between Different Populations.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 785-792, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #349, posted November 2002.

Nain et al. Intra-Patient Prone to Supine Colon Registration for Synchronized Virtual Colonoscopy.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 573-580, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #348, posted November 2002.

O'Donnell et al. New Approaches to Estimation of White Matter Connectivity in Di usion Tensor MRI: PDE-Based and Geodesics in a Tensor-Warped Space.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 459-466, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #347, posted November 2002.

Pohl et al. Incorporating Non-rigid Registration into Expectation Maximization Algorithm to Segment MR Images.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 564-571, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #346, posted November 2002.

Timoner et al. Performance Issues in Shape Classification.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 355-362, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #345, posted November 2002.

Watanabe et al. Level Set based Integration of Segmentation and Computational Fluid Dinamics for Flow Correction in Phase Contrast Augiography.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part II. pages 405-412, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #344, posted November 2002.

Zou et al. Statistical Validation of Automated Probabilistic Segmentation Against Composite Latent Expert Ground Truth in MR Imaging of Brain Tumors.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 315-322, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #343, posted November 2002.

Warfield et al. STAPLE: Simultaneous Truth and Performance level Estimation. An algorithm for the evaluation of image segmentations.
A presentation at the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002), September 25-28, 2002. Tokyo, Japan. SPL Technical Report #342, posted November 2002.

Warfield et al. Validation of Image Segmentation and Expert Quality with an Expectation-Maximization Algorithm.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 298-306, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #341, posted November 2002.

Warfield et al. Advanced Nonrigid Registration Algorithms for Image Fusion.
In Brain Mapping: The Methods. Ed. Arthur W. Toga and John C. Mazziotta. San Diego, USA: Academic Press. Ch.24:661-690, 2002. SPL Technical Report #340, posted November 2002.

Jaume et al. Labeling the Brain Surface Using a Deformable Multiresolution Mesh.
Proceedings of the Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2002) Part I. pages 451-458, September 25-28, 2002. Tokyo, Japan. SPL Technical Report #336, posted November 2002.

Vaina et al. Visual deficits in a patient with 'kaleidoscopic disintegration of the visual world'.
European Journal of Neurology, 2002; 9(5):463-477. SPL Technical Report #334, posted October 2002.

Rodt et al. 3D visualisation of the middle ear and adjacent structures using reconstructed multi-slice CT datasets, correlating 3D images and virtual endoscopy to the 2D cross-sectional images.
Neuroradiology, 2002; 44(9):783-90. SPL Technical Report #330, posted September 2002.

Lee et al. Fusiform Gyrus Volume reduction in First-Episode Schizophrenia.
Arch Gen Psychiatry, 2002; 59:775-781. SPL Technical Report #329, posted September 2002.

Mats Bjornemo, Anders Brun: White Matter Fiber Tracking Using Diffusion Tensor MRI.
Master's Thesis, Linkoping University, Sweden. SPL Technical Report #327, posted September 2002.

Frumin et al. Shape Differences in the Corpus Callosum in First-Episode Schizophrenia and First-Episode Psychotic Affective Disorder.
Am J Psychiatry 2002; 159(5):866-868. SPL Technical Report #324, posted August 2002.

Shenton et al. Amygdala-hippocampal shape differences in schizophrenia: the application of 3D shape models to volumetric MR data.
Psychiatry Research Neuroimaging, 2002; 115:15-35. SPL Technical Report #323, posted August 2002.

Levitt et al. MRI study of caudate nucleus volume and its cognitive correlates in neuroleptic-naive patients with schizotypal personality disorder.
Am J Psychiatry, 2002; 159(7):1190-1197. SPL Technical Report #322, posted July 2002.

McCarley et al. Association between smaller left posterior superior temporal gyrus volume on magnetic resonance imaging and smaller left temporal P300 amplitude in first-episode schizophrenia.
Arch Gen Psychiatry, 2002; 59(4):321-331. SPL Technical Report #321, posted July 2002.

Warfield et al. Real-Time Registration of Volumetric Brain MRI by Biomechanical Simulation of Deformation during Image Guided Neurosurgery.
Comput Visual Sci 2002; 5:3-11. SPL Technical Report #320, posted July 2002.

Westin et al. A Dual Tensor Basis Solution to the Stejskal-Tanner Equations for DT-MRI.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #319, posted July 2002.

Krissian et al. Fast and Automatic Vessel Centerline Detection for MRA.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #318, posted July 2002.

Haber et al. Model-based 3D Tracking of Cardiac Motion in HARP Images.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #317, posted July 2002.

Watanabe et al. Partial Differential Equation Based Flow Correction Using Mass Conservation for Phase Contrast Angiography.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #316, posted July 2002.

Brun et al. White Matter Tractography Using Sequential Importance Sampling.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #315, posted July 2002.

Mamata et al. Visualization of Collateral Nerve Fibers of Human Cervical Spinal Cord: Direct Histologic Validation of Diffusion Tensor Imaging.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #314, posted July 2002.

Saiviroonporn et al. Real-time Interactive Catheter Tracking by Multiresolution Volumetric MR Imaging.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #313, posted July 2002.

Zhao et al. High-resolution MR Imaging of the Petrous Bone using a Single-Slab Three-dimensional TZweighted Fast Spin-Echo Sequence.
Proceedings of the Tenth Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'2002), May 18-24, 2002. Honolulu, Hawaii, USA. SPL Technical Report #312, posted July 2002.

Westin et al. Processing and Visualization for Diffusion Tensor MRI.
Medical Image Analysis 2002; 6:93-108. SPL Technical Report #307, posted June 2002.

Kubicki et al. Uncinate Fasciculus Findings in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study.
Am J Psychiatry 2002; 159:813-820. SPL Technical Report #306, posted June 2002.

Zou et al. Comparison of Accuracy and Interreader Agreement in Side-by-Side versus Independent Evaluations of MR Imaging of the Medial Collateral Ligament of the Elbow.
Acad Radiol 2002; 9:520-525. SPL Technical Report #304, posted May 2002.

Wei et al. Quantitative Analysis of MRI Signal Abnormalities of Brain White Matter with High Reproducibility and Accuracy.
J. Magn. Reson. Imaging, 2002; 15:203-209. SPL Technical Report #303, posted May 2002.

Mamata et al. High-Resolution Line Scan Diffusion Tensor MR Imaging of White Matter Fiber Tract Anatomy. (Text) Figures
AJNR, 2002; 23(2):67-75. SPL Technical Report #302, posted April 2002.

Normand et al. Sample size onsiderations in observational health are quality studies.
Statist. Med. 2002; 21:331-345. (DOI 10.1002/sim.1020). SPL Technical Report #296, posted February 2002.

Nestor et al. A new statistical method for testing hypotheses of neuropsychological/MRI relationships in schizophrenia: partial least squares analysis.
Schizophrenia Research 2002; 53:57-66. SPL Technical Report #286, posted February 2002.

Rexilius et al. Automatic Nonrigid Registration for Tracking Brain Shift during Neurosurgery.
Workshop Bildverarbeitung fuer die Medizin, Springer Verlag, Heidelberg, Germany, March 2002, p.135-138. SPL Technical Report #297, posted March 2002.

Alida Tei: Multi-Modality Image Fusion by Real-Time Tracking of Volumetric Brain Deformation During Image Guided Neurosurgery.
Master's Thesis, MIT, 2002. SPL Technical Report #285, posted January 2002.

2001

Warfield et al. An Intrinsic Coordinate System of the Developing Human Brain.
Fifth International Conference on Cognitive and Neural Systems, May 31-Jun 2, 2001. Boston, USA. SPL Technical Report #295, posted February 2002.

Tei et al. Tracking Volumetric Brain Deformations During Image Guided Neurosurgery.
In VISIM: Information Retrieval and Exploration in Large Medical Image Collections, in conjunction with Medical Image Computing and Computer Aided Intervention (MICCAI) 2001, Springer Verlag, 2001. SPL Technical Report #294, posted February 2002.

Tsai et al. Model-based Curve Evolution Techniques for Image Segmentation.
IEEE conference on computer vision and pattern recognition (CVPR), 2001. SPL Technical Report #293, posted February 2002.

Zollei et al. 2D-3D Rigid Registration of X-Ray Fluoroscopy and CT Images Using Mutual Information and Sparsely Sampled Histogram Estimators.
IEEE CVPR, 2001. SPL Technical Report #292, posted February 2002.

Lilla Zollei: 2D-3D Rigid-Body Registration of X-Ray Fluoroscopy and CT Images.
Master's Thesis, MIT, 2001. SPL Technical Report #291, posted February 2002.

Lauren O'Donnell: Semi-Automatic Medical Image Segmentation.
Master's Thesis, MIT, 2001. SPL Technical Report #290, posted February 2002.

Ferrant et al. Registration of 3D Intraoperative MR Images of the Brain Using a Finite Element Biomechanical Model.
IEEE Trans Med Imag 2001; 20(12):1384-1397. SPL Technical Report #289, posted February 2002.

Nain et al. An Interactive Virtual Endoscopy Tool.
Satellite Workshop at the Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001), Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #288, posted February 2002.

Timoner et al. Fast linear Elastic Matching without Landmarks.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 1358-1360, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #283, posted December 2001.

Ferrant et al. Surface Based Atlas Matching of the Brain Using Deformable Surfaces and Volumetric Finite Elements.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 1352-1353, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #282, posted December 2001.

Haber et al. Phase-driven Finite Element Model for Spatio-temporal Tracking in Tagged Cardiac MRI.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 1332-1335, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #281, posted December 2001.

O'Donnell et al. Phase-Based User-Steered Image Segmentation.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 1022-1030, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #280, posted December 2001.

Bharatha et al. Evaluation of three-dimensional finite element-based deformable registration of pre- and intraoperative prostate imaging.
Med. Phys. 2001;28(12):2551-1560. SPL Technical Report #279, posted December 2001.

Haker et al. Mass Preserving Mappings and Image Registration.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 120-127, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #278, posted December 2001.

Pachai et al. Unsupervised and adaptive segmentation of multispectral 3D magnetic resonance images of human brain: a generic approach.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 1067-1074, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #276, posted December 2001.

Warfield et al. A Binary Entropy Measure to Assess Nonrigid Registration Algorithms.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 266-274, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #275, posted December 2001.

Golland et al. Deformation Analysis for Shape Based Classification.
In Proceedings of 17th International Conference of Information Processing in Medical Imaging 2001, pp.517-530, June 18-22, 2001, University of California at Davis, California, USA. SPL Technical Report #272, posted November 2001.

Jaume et al. Multiresolution Signal Processing on Meshes for Automatic Pathological Shape Characterization.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 1398-1400, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #271, posted November 2001.

Jaume et al. Multi-Resolution Parameterization of Meshes for Improved Surface Based Registration.
Proceedings of SPIE Medical Imaging, vol. 4322, pages 633-642, February 17-23, 2001. San Diego, USA. SPL Technical Report #270, posted November 2001.

Rexilius et al. A Novel Nonrigid Registration Algorithm and Applications.
Proceedings of Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2001) pages 923-931, Oct 14-17, 2001. Utrecht, The Netherlands. SPL Technical Report #269, posted November 2001.

Jan Rexilius: Physics-Based Nonrigid Registration for Medical Image Analysis.
Master's Thesis, 2001. Medical University of Luebeck, Germany. SPL Technical Report #268, posted November 2001.

Lorigo et al. CURVES: Curve Evolution for Vessel Segmentation.
Medical Image Analysis 2001;5:195-206. SPL Technical Report #267, posted November 2001.

Polina Golland: Statistical Shape Analysis of Anatomical Structures.
Ph.D. Thesis, MIT, 2001. SPL Technical Report #244, posted November 2001.

Zou et al. Receiver Operating Characteristic (ROC) Analysis.
Statistic in Epidemiology Report 2001. Number 1. SPL Technical Report #237, posted September 2001.

Zou et al. On Estimating a Transformation Correlation Coefficient.
J. Appl Statist, 2001, 6. SPL Technical Report #225, posted August 2001.

O'Malley et al. Bayesian Regression Methodology for Estimating a Receiver Operating Characteristic Curve with Two Radiologic Applications: Prostate Biopsy and Spiral CT of Ureteral Stones.
Acad Radiol 2001; 8:713-725.SPL Technical Report #224, posted August 2001.

Kelly H. Zou: Comparison of Correlated Receiver Operating Characteristic Curves Derived from Repeated Diagnostic Test Data.
Acad Radiol 2001; 8:225-233.SPL Technical Report #223, posted August 2001.

Zou et al. Bayesian regression methodology for receiver operating characteristic curve analysis.
Proc 10th International Symposium on Applied Stochastic Models and Data Analysis. Govaert G, Janssen J, Limnios (Eds). Universite De Technologie De Compiegne, Compiegne, France. 2001. pp.1043-1048. SPL Technical Report #221, posted August 2001.

Westin et al. Three-dimensional Adaptive Filtering in Magnetic Resonance Angiography.
J. Magn. Reson. Imaging, 2001;14:63-71. SPL Technical Report #220, posted July 2001.

Gering et al. An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and an Open MR.
J. Magn. Reson. Imaging 2001; 13:967-975. SPL Technical Report #219, posted June 2001.

Matthieu Ferrant: Physics-based Deformable Modeling of Volumes and Surfaces for Medical Image Registration, Segmentation and Visualization.
Ph.D. Thesis, Universite Catholique de Louvain, 2001. SPL Technical Report #214, posted May 2001.

Nabavi et al. Serial Intraoperative Magnetic Resonance Imaging of Brain Shift.
Neurosurgery 48:787798, 2001.
SPL Technical Report #209, posted April 2001.

Raimundo Sierra: Nonrigid Registration of Diffusion Tensor Images.
Master's Thesis, Swiss Federal Institute of Technology Zurich, 2001.
SPL Technical Report #207, posted March 2001.

Nabavi et al. Neurosurgical Procedures in a 0.5 Tesla, Open-configuration Intraoperative MRI: Planning, Visualization and Navigation.
Automedica, 2001, 00:1-35.
SPL Technical Report #206, posted March 2001.

Dirk-Alexander Sennst: Annotation of processed image data in surgical planning and its visualization with a Java3D based browser. (Abstract)
3D-Visualisierung anatomischer Modelle und Integration der zugrunde liegenden räumlichen Bildfolgen.
Master's Thesis, Heidelberg University, Germany, 2001. SPL Technical Report #203, posted March 2001.

Sperling et al. Regional Magnetic Resonance Imaging Lesion Burden and Cognitive Function in Multiple Sclerosis: A longitudinal study.
Arch Neurol. 2001; 58:115-121. SPL Technical Report #202, posted March 2001.

Kaus et al. Automated Segmentation of MR Images of Brain Tumors. (Abstract)
Radiology 2001; 218(2):586-591. SPL Technical Report #201, posted February 2001.

Jolesz et al. Integration of Interventional MRI With Computer-Assisted Surgery.
J. Magn. Reson. Imaging 2001; 13:69-77. SPL Technical Report #200, posted February 2001.

Pergolizzi et al. Intra-Operative MR Guidance During Trans-Sphenoidal Pituitary Resection: Preliminary Results.
J. Magn. Reson. Imaging 2001; 13:136-141. SPL Technical Report #199, posted January 2001.

Kacher et al. Motion Robust Imaging for Continuous Intra-operative MR.
J. Magn. Reson. Imaging 2001; 13:158-161. SPL Technical Report #197, posted January 2001.

Mamata et al. Intraoperative Diffusion Imaging on a 0.5 Tesla Interventional Scanner.
J. Magn. Reson. Imaging 2001; 13:115-119. SPL Technical Report #196, posted January 2001.

Michael Leventon: Statistical Models for Medical Image Analysis. (PostScript)Ph.D. Thesis, MIT, 2000. SPL Technical Report #228, posted August 2001.

Leventon et al. Level Set Based Segmentation with Intensity and Curvature Priors. (PostScript)Mathematical Methods in Biomedical Image Analysis. (MMBIA), 2000. SPL Technical Report #229, posted August 2001.

Leventon et al. Statistical Shape Influence in Geodesic Active Contours. (PostScript)Comp. Vision and Patt. Recon. (CVPR), 2000. SPL Technical Report #230, posted August 2001.

2000

Ron Kikinis: HPC in Image-Guided Surgery.Oral Presentation at PDC Annual Conference, Center for Parallel Computers (PDC), Royal Institute of Technology (KTH), Stockholm, Sweden. December 14-15, 2000. SPL Technical Report #193, posted December 2000.

Ron Kikinis: IGT: Today and Tomorrow.Oral Presentation at the Washington CAS Group Meeting. 9/19/2000. SPL Technical Report #192, posted December 2000.

Haker et al. Nondistorting Flattening for Virtual Colonoscopy.
Presentation at the Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. SPL Technical Report #187, posted December 2000.

Warfield et al. Real-Time Biomechanical Simulation of Volumetric Brain Deformation for Image Guided Neurosurgery.
In SC 2000: High Performance Networking and Computing Conference; 2000 Nov 4-10; Dallas, USA, 230:1-16, 2000. SPL Technical Report #186, posted November 2000.

Westin et al. Affine Adaptive Filtering of CT data.
Medical Image Analysis 2000; 4:161-177. SPL Technical Report #204, posted March 2001.

H.F.Hodder: Bloodless Revolution
Harvard Magazine, pp.37-47, November-December 2000. SPL Technical Report #185, posted November 2000.

Bhalerao et al. Fast Re-Rendering of Volume and Surface Graphics by Depth, Color and Opacity Buffering. Medical Image Analysis, Elsevier Science, 4:235-251, 2000. SPL Technical Report #184, posted November 2000.

Westin et al. Segmentation By Adaptive Geodesic Active Contours.
In Proceedings of International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.266-275. SPL Technical Report #183, posted October 2000.

Schorr et al. Distributed Modular Computer-Integrated Surgical Robotic Systems: Architecture for Intelligent Object Distribution(2MB zipped PostScript version), 0.6MB Microsoft Word Document. In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.979-987. SPL Technical Report #181, posted October 2000.

Golland et al. Small Sample Size Learning for Shape Analysis of Anatomical Structures.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.72-82. SPL Technical Report #181, posted October 2000.

Everett et al. A 3D System for Planning and Simulating Minimally-Invasive Distraction Osteogenesis of the Facial Skeleton. (1MB zipped PostScript version), 2.2MB Microsoft Word Document.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.1029-1039. SPL Technical Report #180, posted October 2000.

Chinzei et al. MR Compatible Surgical Assist Robot: System Integration and Preliminary Feasibility Study.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.921-930. SPL Technical Report #180, posted October 2000.

Bzostek et al. Distributed Modular Computer-Integrated Surgical Robotic Systems: Implementation using Modular Software and Networked Systems.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.969-978. SPL Technical Report #179, posted October 2000.

Alberola et al. diSNei: A Collaborative Environment for Medical Images Analysis and Visualization.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.814-823. SPL Technical Report #178, posted October 2000.

Ferrant et al. Registration of 3D Intraoperative MR Images of the Brain Using a Finite Element Biomechanical Model.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.19-28. SPL Technical Report #177, posted October 2000.

Butz et al. Pre- and Intra-operative Planning and Simulation of Percutaneous Tumor Ablation.
International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.317-326. SPL Technical Report #176, posted October 2000.

Kaus et al. Simulation of Corticospinal Tract Displacement in Patients with Brain Tumors.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.9-18. SPL Technical Report #175, posted October 2000.

Ruiz-Alzola et al. Nonrigid Registration of 3D Scalar, Vector and Tensor Medical Data.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.541-550. SPL Technical Report #174, posted October 2000.

Warfield et al. Intraoperative Segmentation and Nonrigid Registration for Image Guided Therapy.
In Proceedings of Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh, Pennsylvania, USA. 2000. pp.176-185. SPL Technical Report #173, posted October 2000.

Kettenbach et al. Interventional and Intraoperative Magnetic Resonance Imaging
Annu. Rev. Biomed. Eng. 02:661-690, 2000. SPL Technical Report #172, posted October 2000.

Haker et al. Conformal Surface Parameterization for Texture Mapping. (1.2MB zipped PostScript version).
IEEE Transaction on Visualization and Computer Graphics, 6(2), April-June 2000. SPL Technical Report #171, posted September 2000.

Hata et al. Three-Dimensional Optical Flow Method for Measurement of Volumetric Brain Deformation from Intraoperative MR Images.
J Compt Assist Tomogra, 24(4): 531-538, 2000. SPL Technical Report #170, posted September 2000.

Warfield et al. Adaptive, Template Moderated, Spatially Varying Statistical Classification.
Medical Image Analysis, 4(1):43-55, 2000. SPL Technical Report #169, posted September 2000.

Hirayasu et al. Planum Temporale and Heschl Gyrus Volume Reduction in Schizophrenia: An MRI Study of First-episode Patients.
Arch.Gen. Psychiatry 57:692-699, 2000. SPL Technical Report #167, posted August 2000.

Hirayasu et al. Hippocampus and Superior Temporal Gyrus Volume in First-episode Schizophrenia.
Arch. Gen. Psychiatry 57:618-619, 2000. (Letter to the Editor) SPL Technical Report #166, posted August 2000.

Kyriakos et al. Sensitivity Profiles From an Array of Coils for Encoding and Reconstruction in Parallel (SPACE RIP).
Magnetic Resonance in Medicine, 44:301-308, 2000. SPL Technical Report #165, posted August 2000.

Norwitz et al. Brief Report: Separation of Conjoined Twins with the Twin Reversed-Arterial-Perfusion Sequence after Prenatal Planning with Three-Dimensional Modeling.
New England Journal of Medicine, 343(6), 2000. SPL Technical Report #164, posted August 2000.

Mulkern et al. Multi-component Apparent Diffusion Coefficients in Human Brain: Relationship to Spin-Lattice Relaxation.
Magnetic Resonance in Medicine, 44:292-300, 2000. SPL Technical Report #163, posted August 2000.

Guttmann et al. Discrimination of Relapsing and Progressive MS through MRI Estimates of Brain Parenchymal Fraction and Lesion Burden.
In 52nd Annual American Academy of Neurology Meeting, April-May 2000. SPL Technical Report #155, posted May 2000.

Schreyer et al. Virtual Cystoscopy: Color Mapping of Bladder Wall Thickness.
Invest Radiol. 35:331-334, 2000. SPL Technical Report #154, posted May 2000.

Warfield et al. An Image Processing Strategy for the Quantification and Visualization of Exercise Induced Muscle MRI Signal Enhancement.
JMRI, 11:525-531, 2000. SPL Technical Report #153, posted May 2000.

Guttmann et al. White Matter Abnormalities in Mobility-impaired Older Persons.
Neurology, 54:1277-1283, 2000. SPL Technical Report #150, posted May 2000.

Dickey et al. Large CSF Volume Not Attributable to Ventricular Volume in Schizotypal Personality Disorder.
Am J Psychiatry, 157:48-54, 2000. SPL Technical Report #146, posted March 2000.

Niznikiewicz et al. Abnormal Angular Gyrus Assymetry in Schizophrenia.
Am J Psychiatry, 157:428-437, 2000. SPL Technical Report #145, posted March 2000.

Fielding et al. MR-Based Three-Dimensional Modeling of the Normal Pelvic Floor in Women.
AJR, 174:657-660, 2000. SPL Technical Report #144, posted March 2000.

Torsten Butz: Pre- and Intra-operative Optimization of Cryotherapy. (5.5MB gzipped PostScript version).
Master's Thesis, Swiss Federal Institute of Technology, 2000. SPL Technical Report #142, posted March 2000.

Nakajima et al. 3D MRI Reconstruction for Surgical Planning and Guidance.
In Advanced Neurosurgical Navigation. Eds E. Alexander III and R.J. Maciunas Thieme Medical Publishers, Inc, New York, pp.137-145, 1999. SPL Technical Report #159, posted May 2000.

Inder et al. Periventricular White Matter Injury in the Premature Infant is Followed by Reduced Cerebral Cortical Gray Matter Volume at Term.
Annals of Neurology, 46(5):755-760, 1999. SPL Technical Report #156, posted May 2000.

Inder et al. The Postmigrational Development of Polymicrogyria Documented by Magnetic Resonance Imaging from 31 Weeks Postconceptional Age.
Annals of Neurology, 45(6):798-801, 1999. SPL Technical Report #157, posted May 2000.

Inder et al. Early Detection of Periventricular Leukomalacia by Diffusion-weighted Magnetic Resonance Imaging Techniques.
J Pediatr, 134:631-634, 1999. SPL Technical Report #158, posted May 2000.

McCarley et al. MRI Anatomy of Schizophrenia.
Psychiatry, 156:1105-1107, 1999. SPL Technical Report #147, posted March 2000.

Khoury et al. Changes in Serum Levels of ICAM and TNF-R Correlate with Disease Activity in Multiple Sclerosis.
Neurology, 53(4):758-764, 1999. SPL Technical Report #143, posted March 2000.

Dickey et al. Schizotypal Personality Disorder and MRI Abnormalities of Temporal Lobe Gray Matter.
Biological Psychiatry, 45:1393-1402, 1999. SPL Technical Report #141, posted February 2000.

1999

Golland et al. AnatomyBrowser: A Novel Approach to Visualization and Integration of Medical Inform ation. (1.2MB pdf version)
Computer Assisted Surgery, 4:129-143, 1999. SPL Technical Report #140, posted December 1999.

Kaus et al. Segmentation of Meningiomas and Low Grade Gliomas in MRI.
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.1-10. SPL Technical Report #137, posted November 1999.

Angenent et al. On the Laplace_Beltrami Operator and Brain Surface Flattening. ( 8.2MB PostScript file)
IEEE Transactions on Medical Imaging, 18:700-711, 1999. SPL Technical Report #136, posted November 1999.

Chinzei et al. MR Compatibility of Mechatronic Devices: Design Criteria.
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.1020-31. SPL Technical Report #160, posted June 2000.

Gering et al. An Integrated Visualization System for Surgical Planning and Guidance using Image Fusion and Interventional Imaging.
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. SPL Technical Report #149, posted May 2000.

Westin et al. Image Processing for Diffusion Tensor Magnetic Resonance Imaging.
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.441-452. SPL Technical Report #148, posted May 2000.

Warfield et al. Fractional Segmentation of White Matter.
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.62-71. SPL Technical Report #135, posted November 1999.

Angenent et al. Conformal Geometry and Brain Flattening.
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.271-278. SPL Technical Report #134, posted October 1999.

Ferrant et al. 3D Image Matching Using a Finite Element Based Elastic Deformation Model. (450kB zipped PostScript version)
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.202-209. SPL Technical Report #133, posted October 1999.

Hata et al. A volumetric optical flow method for measurement of brain deformation from intraoperative magnetic resonance images. (180kB zipped PostScript version)
In Proceedings of Second International Conference on Medical Image Computing and Computer-assisted Interventions, Cambridge, U.K. 1999. pp.928-935. SPL Technical Report #132, posted September 1999.

David Gering. A System for Surgical Planning and Guidance using Image Fusion and Interventional MR. (22MB zipped PostScript version)
MIT Master's Thesis, 1999. SPL Technical Report #131, posted August 1999.

Ferenc A. Jolesz: Image Guidance in Neurosurgery. Then and now.
Thirty-Seven Annual Merrill C. Sosman Lecture, May 1999. SPL Technical Report #129, posted August 1999.

Tina Kapur: Knowledge Based 3D Medical Segmentation.
Ph.D. Thesis, MIT Artifical Intelligence Laboratory, 1999. SPL Technical Report #128, posted July 1999.

Golland et al. Statistical Shape Analysis Using Fixed Topology Skeletons: Corpus Callosum Study. (236kB pdf version), (100kB zipped PostScript version)
In Proceedings of 16th International Conference of Information Processing in Medical Imaging 1999, pp.382-387, June/July 1999, Visegrad, Hungary. SPL Technical Report #139, posted November 1999.

Lorigo et al. Co-dimension 2 Geodesic Active Contours for MRA Segmentation.
(1.2MB zipped PostScript version), (390kB pdf version)
In Proceedings of 16th International Conference of Information Processing in Medical Imaging 1999, pp.126-139, June/July 1999, Visegrad, Hungary. SPL Technical Report #127, posted July 1999.

Hirayasu et al. Subgenual Cingulate Cortex Volume in First-Episode Psychosis.
Am J Psychiatry 156:1091-1093, July 1999. SPL Technical Report #126, posted July 1999.

Levitt et al. Quantitative Volumetric MRI Study of the Cerebellum and Vermis in Schizophrenia: Clinical and Cognitive Correlates.
Am J Psychiatry, 156:1105-1107, July 1999. SPL Technical Report #125, posted July 1999.

Nabavi et al. Image Guided Neurosurgery Visualization of Brain Shift.
In: Navigated Brain Surgery, pp 17-26. Eds. Spetzger, Stiehl, Gilsbach, ISBN 3-89653-553-6, Aachen 1999. SPL Technical Report #124, posted July 1999.

Kikinis et al. Quantitative Follow-up of Patients with Multiple Sclerosis using MRI: Technical Aspects.
JMRI, 9(4):519-530, 1999. SPL Technical Report #122, posted June 1999.

Guttmann et al. Computerized Image Processing for Quantitative Follow-up of Patients.
JMRI, 9(4):509-518, 1999. SPL Technical Report #121, posted June 1999.

Kaus et al. Adaptive Template Moderated Brain Tumor Segmentation in MRI.
Workshop fuer Bildverarbeitung in der Medizin, Heidelberg, Germany, Springer Verlag, pp. 102-105, March, 1999. SPL Technical Report #118, posted June 1999.

Panych et al. Real-time Interactive Catheter Tracking by MRI.
International Society for Magnetic Resonance in Medicine Seventh Scientific Meeting and Exhibition, Philadelphia PA, 1999. Poster Presentation No. 1948. SPL Technical Report #117, posted June 1999.

Panych et al. Stereotactic fMRI.
International Society for Magnetic Resonance in Medicine Seventh Scientific Meeting and Exhibition, Philadelphia PA, 1999. Poster Presentation No. 797. SPL Technical Report #116, posted June 1999.

Yoo et al. Functional MRI Using Non-Fourier Spatially Selective RF Encoding.
Magnetic Resonance in Medicine 41:759-766, 1999. SPL Technical Report #115, posted June 1999.

Panych et al. Selection of High Definition 2D Virtual Profiles with Multiple RF Pulse Excitations Along Interleaved Echo-Planar k-Space Trajectories.
Magnetic Resonance in Medicine, 41:224-229, 1999. SPL Technical Report #110, posted March 1999.

Warfield et al. Nonlinear Registration and Template Driven Segmentation
In Brain Warping. Ed. Arthur W. Toga, (Academic Press) Ch.4:67-84, 1999. (370kB gzipped PostScript Version). SPL Technical Report #120, posted June 1999.

Hollinger et al. Superior Temporal Gyrus volume Abnormatlities and Thought Disorder in Left-Handed Schizophrenic Men.
Am J Psychiatry, 156:1730-1735, 1999. SPL Technical Report #161, posted July 2000.

Kwon et al. Left planum temporale volume reduction in schizophrenia.
Arch. Gen. Psychiatry, 56:142-148, 1999. SPL Technical Report #162, posted July 2000.

Nakagohri et al. Virtual Pancreatoscopy.
Comp Aid Surg 3:264-268, 1998. SPL Technical Report #119, posted June 1999.

Kwon et al. An MRI study of cavum septi pellucudi in schizophrenia, affective disorder, and schizotypal personality disorder.
Am J Psychiatry, 155:509-515, 1998. SPL Technical Report #130, posted August 1999.

Guttmann et al. White Matter Changes with Normal Aging.
Neurology, 50:972-978, 1998. SPL Technical Report #113, posted March 1999.

1998

Ozlen et al. The excision of cortical dysplasia in the language area with a surgical navigator: A Case Report.
Epilepsia, 39(12):1361-1366, 1998. SPL Technical Report #111, posted March 1999.

Zientara et al. MRI-Monitoring of Laser Ablation Using Optical Flow.
JMRI, 8:1306-1318. 1998. (0.5 MB gzipped PostScript Version). SPL Technical Report #152, posted May 2000.

Nakajima et al. A Simple Method of Scalp Localization Using Multiplanar Reconstruction of MR Images.
A Technical Note. Surg Neurol, 50:597-599, 1998. SPL Technical Report #151, posted May 2000.

Potts et al. Visual Hemifield Mapping Using Transactionscranial Magnetic Stimulation Coregistered with Cortical Surfaces Derived from Magnetic Resonance Images.
J Clin Neurophysiology, 15(4):344-350, 1998. SPL Technical Report #109, posted March 1999.

Kikinis et al. High Performance Computing (HPC) in Medical Image Analysis (MIA) at the Surgical Planning Laboratory (SPL).
Proceedings of the 3rd High Performance Computing Asia Conference & Exhibition, September 22-25, 1998. Singapore. (0.6 MB gzipped PostScript Version). SPL Technical Report #108, posted December 1998.

Hirayasu et al. Lower Left Temporal Lobe MRI Volumes in Patients with First-episode Schizophrenia Compared with Psychotic Patients with First-episode Affective Disorder and Normal Subjects.
American Journal of Psychiatry. 155(10):1384-1391, 1998. SPL Technical Report #107, posted November 1998.

Warfield et al. Real-Time Image Segmentation for Image-Guided Surgery.
Abstract #1028 at the High Performance Networking and Computing Conference, November 7-13, 1998. Orlando, Florida, USA. SPL Technical Report #106, posted November 1998.

Warfield et al. A High Performance Computing Approach to the Registration of Medical Imaging Data.
Parallel Computing 24:1345-1368,, 1998. (2.7 MB gzipped PostScript Version). SPL Technical Report #105, posted November 1998.

Richolt et al. Planning and evaluation of reorienting osteotomies of the proximal femur in cases of SCFE using virtual three-dimensional models.
Proceedings of First International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98), pp. 1-8, ISBN 3-540-65136-5, Lecture Notes in Computer Science, Eds. W.M. Wells, A. Colchester, and S. Delp, Springer Verlag, October, 1998. Boston. SPL Technical Report #103, posted November 1998.

Hata et al. Multimodality Deformable Registration of Pre- and Intraoperative Images for MRI-Guided Brain Surgery
Proceedings of First International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98), pp. 1067-1074, ISBN 3-540-65136-5, Lecture Notes in Computer Science, Eds. W.M. Wells, A. Colchester, and S. Delp, Springer Verlag, October, 1998. Boston. SPL Technical Report #102, posted November 1998.

Westin et al. Tensor Controlled Local Structure Enhancement of CT Images for Bone Segmentation
Proceedings of First International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98), pp. 1205-1212, ISBN 3-540-65136-5, Lecture Notes in Computer Science, Eds. W.M. Wells, A. Colchester, and S. Delp, Springer Verlag, October, 1998. Boston. SPL Technical Report #101, posted November 1998.

Warfield et al. Adaptive Template Moderated Spatially Varying Statistical Classification.
Proceedingsof First International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98), pp. 231-238, ISBN 3-540-65136-5, Lecture Notes in Computer Science, Eds. W.M. Wells, A. Colchester, and S. Delp, Springer Verlag, October, 1998. Boston.(100 kB gzipped PostScript Version) SPL Technical Report #100, posted November 1998.

Huppi et al. Microstructural development of Human Newborn Cerebral White Matter Assessed in Vivo by Diffusion Tension Magnetic Resonance Imaging.
Pediatr Res 44:584-590, 1998. SPL Technical Report #98, posted October 1998.

Golland et al. AnatomyBrowser: A Framework for Integration of Medical Information.
Proceedings of First International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'98), pp. 720-731, ISBN 3-540-65136-5, Lecture Notes in Computer Science, Eds. W.M. Wells, A. Colchester, and S. Delp, Springer Verlag, October, 1998. Boston. SPL Technical Report #97, posted October 1998.

Panych et al. Digital Wavelet Encoded MRI: A New Wavelet Encoding Methodology
JMRI 8(5):1135-1144, 1998. SPL Technical Report #96, posted October 1998.

Kettenbach et al. Monitoring and Visualization Techniques for MR-Guided Laser Ablations in Open MR System
JMRI 8(4):933-943, 1998. SPL Technical Report #95, posted August 1998.

Anderson et al. Anatomy Browser: Java-based Interactive Teaching Tool for Learning Human Neuroanatomy.
Radiological Society of North America - Electronic Journal, Vol. 2, 1998. http://ej.rsna.org/ej2/0050-97.fin/index.html
SPL Technical Report #94, posted August 1998.

Yoo et al. Adaptive Functional MRI using Radio-Frequency Encoding.
The 4th International Conference on Functional Mapping of the Human Brain p.541, June 7-12, 1998. Montreal, Canada. SPL Technical Report #93, posted August 1998.

Yoo et al. Adaptive Functional MRI using Non-Fourier Encoding.
ISMRM Sixth Scientific Meeting and Exhibition p.303, April 18-24, 1998. Sydney, Australia. SPL Technical Report #92, posted August 1998.

Warfield et al. Automatic Segmentation of MRI of the Knee.
ISMRM Sixth Scientific Meeting and Exhibition p.563, April 18-24, 1998. Sydney, Australia. SPL Technical Report #91, posted July 1998.

Montain et al. Hypohydration Effects on Skeletal Muscle Performance and Metabolism: A 31P MRS study (1 MB gzipped PostScript Version), (0.1 MB pdf file)
J Appl Physiol 84(6):1889-1894, 1998. SPL Technical Report #90, posted June 1998.

Sperling et al. Integration of fMRI with Intraoperative Imaging Techniques
A Poster at the 4th International Conference on Functional Mapping of the Human Brain, June 7-12, 1998. Montreal, Canada. SPL Technical Report #89, posted June 1998.

Hata et al. Computer-Assisted Intra-Operative MRI Monitoring of Interstitial Laser Therapy in the Brain: A Case Report.
In press in SPIE J Biomed Optics 3(3):304-311, 1998. SPL Technical Report #83, posted May 1998.

Kettenbach et al. 3D modeling of the chest in patients with implanted cardiac defibrillator for further bioelectrical simulation
Submitted and accepted to Proc. Computer Assisted Radiology and Surgery 1998. SPL Technical Report #81, posted May 1998.

Frankenthaler et al. Virtual Otoscopy Otolaryngologic
Clinics of North America. 31(2):383-391, 1998. SPL Technical Report #76, posted May 1998.

Huppi et al. Quantitative Magnetic Resonance Imaging of Brain Development in Premature and Mature Newborns
Ann. Neurol. 43(2):224-235, 1998. SPL Technical Report #75, posted May 1998.

Chabrerie et al. Three-dimensional image reconstruction for low-grade glioma surgery
Neurosurg Focus 4 (4):Article 7, 1998. SPL Technical Report #71, posted April 1998.

Zientara et al. Applicability and Efficiency of Near-Optimal Spatial Encoding for Dynamically Adaptive MRI.
Magnetic Resonance in Medicine, 39:204-213, 1998. SPL Technical Report #63, posted April 1998.

Peled et al. Magnetic Resonance Imaging Shows Orientation and Asymmetry of White Matter Fiber Tracts.
Brain Research 780:27-33, 1998. SPL Technical Report #62, posted April 1998.

Martin et al. Characterization of Neuropathological Shape Deformations. (1.5MB pdf version) (130kB html version) IEEE Transactions. Pattern Analysis and Machine Intelligence, 20(2):97-112, 1998. SPL Technical Report #61, posted April 1998.

Tsao et al. Computer-Assisted Quantification of Periaxial Bone Rotation
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Young et al. Three-Dimensional CT for Planning Urologic Surgery R.
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Sato et al. 3D Multi-Scale Line Filter for Segmentation and Visualization of Curvilinear Structures in Medical Images
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Saiviroonporn et al. Real Time Interactive 3D Segmentation.
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